PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678450039
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 413aa    MW: 44900.1 Da    PI: 6.7516
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678450039genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.71.5e-3632146189
        TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssaseceaesssssasnsss 87 
                a+g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++               + +++ce+e++++++++ + 
  678450039  32 ATGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDELAQLppwhptgqnvnfeRDEEHNKCEEEEQQQQQQHGEL 131
                589**************************************************************99998888887765555578855555555553322 PP

        TCP  88 g.............k 89 
                               
  678450039 132 VaseasskrqvmmaG 146
                244444443333321 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.5E-3433150IPR005333Transcription factor, TCP
PROSITE profilePS5136933.0333593IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MGDSSNFTAP PPSRLAPRGE IVEVQGGHIV RATGRKDRHS KVCTAKGPRD RRVRLAAHTA  60
IQFYDVQDRL GYDRPSKAVD WLIKKAKTAI DELAQLPPWH PTGQNVNFER DEEHNKCEEE  120
EQQQQQQHGE LVASEASSKR QVMMAGGEDG MHKNPNSQNS SFLHSSLHSD AIADTMKSLF  180
PMGASAEASS SSMQFQGFQA SDLLSGNSTN SQDLRLSLQS FQDPILLHHQ PPEQAHQRAY  240
SLLGFDGTAN WAEHHQHAAA AATAAAELSR FQRLTAWNPG GEDSNNGNGG AAQGFLFNSQ  300
QPTLQQLSGH THFSSQRGPL QSSNTPSVRA WMDPSGVATA IASSHHNQHQ QQHQHLLLPT  360
VVPIYPSSTQ GIGYASGSGG FSGFPIPARI HGDVEEHDGY SDKPSSVSSD SRH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082738.10.0PREDICTED: transcription factor TCP4-like
RefseqXP_011082737.10.0PREDICTED: transcription factor TCP4-like
TrEMBLA0A0M5L3G71e-150A0A0M5L3G7_9LAMI; TCP transcription factor CIN2A
STRINGPGSC0003DMT4000397861e-124(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32072349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.34e-73TCP family protein